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RSS FeedsIJMS, Vol. 23, Pages 11599: Genome-Wide Investigation and Expression Analysis of the Nitraria sibirica Pall. CIPK Gene Family (International Journal of Molecular Sciences)

 
 

30 september 2022 18:15:15

 
IJMS, Vol. 23, Pages 11599: Genome-Wide Investigation and Expression Analysis of the Nitraria sibirica Pall. CIPK Gene Family (International Journal of Molecular Sciences)
 


The calcineurin B-like-interacting protein kinase (CIPK) protein family plays a key role in the plant calcium ion-mediated signal transduction pathway, which regulates a plant’s response to abiotic stress. Nitraria sibirica pall. (N. sibirica) is a halophyte with a strong tolerance for high salt environments, yet how it is able to deal with salt stress on a molecular level is still unknown. Due to their function as described in other plant species, CIPK genes are prime candidates for a role in salt stress signaling in N. sibirica. In this study, we identified and analyzed the phylogenetic makeup and gene expression of the N. sibirica CIPK gene family. A total of 14 CIPKs were identified from the N. sibirica genome and were clustered into seven groups based on their phylogeny. The promoters of NsCIPK genes contained multiple elements involved in hormonal and stress response. Synteny analysis identified a total of three pairs of synteny relationships between NsCIPK genes. Each gene showed its own specific expression pattern across different tissues, with the overall expression of CIPK6 being the lowest, and that of CIPK20 being the highest. Almost all CIPK genes tended to respond to salt, drought, and cold stress, but with different sensitivity levels. In this study, we have provided a general description of the NsCIPK gene family and its expression, which will be of great significance for further understanding of the NsCIPK gene family function.


 
68 viewsCategory: Biochemistry, Biophysics, Molecular Biology
 
IJMS, Vol. 23, Pages 11598: Genome-Wide Survey and Functional Verification of the NAC Transcription Factor Family in Wild Emmer Wheat (International Journal of Molecular Sciences)
IJMS, Vol. 23, Pages 11600: Saffron Extract Attenuates Anxiogenic Effect and Improves Cognitive Behavior in an Adult Zebrafish Model of Traumatic Brain Injury (International Journal of Molecular Sciences)
 
 
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